Metagenome of Geodia parva from Karasik seamount - SRA

SRX4072839: Metagenome of Geodia parva from Karasik seamount
1 ILLUMINA (Illumina HiSeq 4000) run: 22.3M spots, 6.7G bases, 3Gb downloads

Design: DNA was extracted with QIAGEN AllPrep DNA/RNA Mini Kit employing two washing steps with buffer AW2 to account for secondary metabolites. DNase and protease-free RNase A (Thermo Scientific) was used to remove remnant RNA from the DNA extracts. Two technical replicates were pooled and the DNA was washed and concentrated by precipitation and re-elution in 75l water.

Submitted by: GEOMAR Helmholtz Centre for Ocean Research Kiel

Study: Langseth Ridge Deep Sea Sponge Microbiome

PRJNA454581 • SRP144767 • All experiments • All runs

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This dataset was collected during expedition PS101 of research vessel POLARSTERN to the Arctic Ocean in 2016. It includes amplicon raw sequence reads (V3V4 region 16S rRNA gene survey), metagenomes and metatranscriptomes of deep-sea sponge-associated and seawater microbes.

Sample:

SAMN09064955 • SRS3265682 • All experiments • All runs

Organism: sponge metagenome

Library:

Name: PS101/0094-3

Instrument: Illumina HiSeq 4000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 22.3M spots, 6.7G bases, 3Gb

Run	# of Spots	# of Bases	Size	Published
SRR7153380	22,264,267	6.7G	3Gb	2019-06-30

ID:: 5558394

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